Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Pde6bP23440 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Pde6bP23440 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.46□□□□□ -0.09
Pde6bP23440 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.46□□□□□ -0.09
Pde6bP23440 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.46□□□□□ -0.09
Pde6bP23440 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.46□□□□□ -0.09
Pde6bP23440 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.46□□□□□ -0.09
Pde6bP23440 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Pde6bP23440 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pde6bP23440 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6bP23440 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.46□□□□□ -0.1
Pde6bP23440 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pde6bP23440 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pde6bP23440 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pde6bP23440 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.46□□□□□ -0.1
Pde6bP23440 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.46□□□□□ -0.1
Pde6bP23440 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pde6bP23440 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.46□□□□□ -0.1
Pde6bP23440 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pde6bP23440 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.46□□□□□ -0.1
Pde6bP23440 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6bP23440 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.45□□□□□ -0.1
Pde6bP23440 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6bP23440 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6bP23440 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6bP23440 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Pde6bP23440 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pde6bP23440 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6bP23440 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6bP23440 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6bP23440 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6bP23440 Gm38002-201ENSMUST00000193255 180 ntBASIC14.45□□□□□ -0.1
Pde6bP23440 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.45□□□□□ -0.1
Pde6bP23440 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6bP23440 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.45□□□□□ -0.1
Pde6bP23440 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6bP23440 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6bP23440 Gm9823-201ENSMUST00000051212 327 ntBASIC14.45□□□□□ -0.1
Pde6bP23440 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6bP23440 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6bP23440 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pde6bP23440 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6bP23440 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6bP23440 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6bP23440 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6bP23440 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.45□□□□□ -0.1
Pde6bP23440 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Pde6bP23440 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.44□□□□□ -0.1
Pde6bP23440 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.44□□□□□ -0.1
Pde6bP23440 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Gm11618-201ENSMUST00000117946 267 ntBASIC14.44□□□□□ -0.1
Pde6bP23440 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.44□□□□□ -0.1
Pde6bP23440 Gm26927-201ENSMUST00000182385 965 ntBASIC14.44□□□□□ -0.1
Pde6bP23440 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.44□□□□□ -0.1
Pde6bP23440 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Pde6bP23440 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.44□□□□□ -0.1
Pde6bP23440 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.44□□□□□ -0.1
Pde6bP23440 Gm9257-201ENSMUST00000221254 232 ntBASIC14.44□□□□□ -0.1
Pde6bP23440 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Pde6bP23440 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.44□□□□□ -0.1
Pde6bP23440 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Pde6bP23440 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pde6bP23440 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms