Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tnfrsf9P20334 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tnfrsf9P20334 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tnfrsf9P20334 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tnfrsf9P20334 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC10.96□□□□□ -0.66
Tnfrsf9P20334 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tnfrsf9P20334 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tnfrsf9P20334 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tnfrsf9P20334 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.95□□□□□ -0.66
Tnfrsf9P20334 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.95□□□□□ -0.66
Tnfrsf9P20334 AC153872.1-201ENSMUST00000199539 128 ntBASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Gm18363-201ENSMUST00000221671 730 ntBASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf9P20334 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Gm8652-201ENSMUST00000181363 964 ntBASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Gm18827-201ENSMUST00000188341 790 ntBASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf9P20334 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms