Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.79□□□□□ -0.36
Fv4P11370 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Fv4P11370 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Fv4P11370 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Fv4P11370 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.79□□□□□ -0.36
Fv4P11370 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.79□□□□□ -0.36
Fv4P11370 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.79□□□□□ -0.36
Fv4P11370 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Fv4P11370 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Fv4P11370 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.79□□□□□ -0.36
Fv4P11370 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fv4P11370 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.78□□□□□ -0.36
Fv4P11370 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.78□□□□□ -0.36
Fv4P11370 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.78□□□□□ -0.36
Fv4P11370 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.78□□□□□ -0.36
Fv4P11370 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.78□□□□□ -0.36
Fv4P11370 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.78□□□□□ -0.36
Fv4P11370 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Fv4P11370 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Fv4P11370 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fv4P11370 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.36
Fv4P11370 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Fv4P11370 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.77□□□□□ -0.36
Fv4P11370 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.77□□□□□ -0.36
Fv4P11370 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fv4P11370 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fv4P11370 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Fv4P11370 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fv4P11370 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.77□□□□□ -0.36
Fv4P11370 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fv4P11370 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fv4P11370 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Fv4P11370 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Fv4P11370 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fv4P11370 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fv4P11370 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fv4P11370 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fv4P11370 Gm15920-201ENSMUST00000118998 402 ntBASIC12.77□□□□□ -0.37
Fv4P11370 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.77□□□□□ -0.37
Fv4P11370 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.77□□□□□ -0.37
Fv4P11370 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.77□□□□□ -0.37
Fv4P11370 Mir7023-201ENSMUST00000185093 64 ntBASIC12.77□□□□□ -0.37
Fv4P11370 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Fv4P11370 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Fv4P11370 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.77□□□□□ -0.37
Fv4P11370 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.77□□□□□ -0.37
Fv4P11370 Gm26315-201ENSMUST00000083890 321 ntBASIC12.77□□□□□ -0.37
Fv4P11370 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Fv4P11370 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fv4P11370 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fv4P11370 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fv4P11370 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fv4P11370 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fv4P11370 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms