Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ccl3P10855 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.63□□□□□ -0.55
Ccl3P10855 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Ccl3P10855 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl3P10855 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ccl3P10855 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccl3P10855 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.62□□□□□ -0.55
Ccl3P10855 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.62□□□□□ -0.55
Ccl3P10855 Gm23270-201ENSMUST00000104055 131 ntBASIC11.62□□□□□ -0.55
Ccl3P10855 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.62□□□□□ -0.55
Ccl3P10855 Gm11531-201ENSMUST00000117614 555 ntBASIC11.62□□□□□ -0.55
Ccl3P10855 Gm14704-201ENSMUST00000120300 874 ntBASIC11.62□□□□□ -0.55
Ccl3P10855 Gm24990-201ENSMUST00000157406 323 ntBASIC11.62□□□□□ -0.55
Ccl3P10855 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Gm2546-201ENSMUST00000182630 991 ntBASIC11.62□□□□□ -0.55
Ccl3P10855 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccl3P10855 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.62□□□□□ -0.55
Ccl3P10855 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.62□□□□□ -0.55
Ccl3P10855 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Gm45186-201ENSMUST00000206874 478 ntBASIC11.62□□□□□ -0.55
Ccl3P10855 Gm5904-201ENSMUST00000210286 865 ntBASIC11.62□□□□□ -0.55
Ccl3P10855 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccl3P10855 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccl3P10855 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ccl3P10855 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ccl3P10855 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.62□□□□□ -0.55
Ccl3P10855 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ccl3P10855 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Ccl3P10855 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccl3P10855 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl3P10855 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ccl3P10855 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ccl3P10855 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Ccl3P10855 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ccl3P10855 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.61□□□□□ -0.55
Ccl3P10855 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ccl3P10855 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.61□□□□□ -0.55
Ccl3P10855 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Gm43138-201ENSMUST00000199123 708 ntBASIC11.61□□□□□ -0.55
Ccl3P10855 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.61□□□□□ -0.55
Ccl3P10855 Gm13097-201ENSMUST00000210722 397 ntBASIC11.61□□□□□ -0.55
Ccl3P10855 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ccl3P10855 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms