Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc9P09633 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc9P09633 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc9P09633 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.02■□□□□ 0.32
Hoxc9P09633 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Hoxc9P09633 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc9P09633 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc9P09633 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc9P09633 Gm13492-201ENSMUST00000119772 665 ntBASIC17.02■□□□□ 0.32
Hoxc9P09633 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC17.02■□□□□ 0.32
Hoxc9P09633 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Hoxc9P09633 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc9P09633 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC17.02■□□□□ 0.32
Hoxc9P09633 Gm18753-201ENSMUST00000201000 566 ntBASIC17.02■□□□□ 0.32
Hoxc9P09633 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC17.02■□□□□ 0.32
Hoxc9P09633 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC17.02■□□□□ 0.32
Hoxc9P09633 AC126253.1-202ENSMUST00000226732 835 ntBASIC17.02■□□□□ 0.32
Hoxc9P09633 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc9P09633 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc9P09633 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxc9P09633 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Hoxc9P09633 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Hoxc9P09633 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hoxc9P09633 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Hoxc9P09633 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Hoxc9P09633 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hoxc9P09633 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hoxc9P09633 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc9P09633 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc9P09633 Gm14371-201ENSMUST00000138925 1518 ntBASIC17.01■□□□□ 0.31
Hoxc9P09633 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Hoxc9P09633 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC17.01■□□□□ 0.31
Hoxc9P09633 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc9P09633 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc9P09633 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc9P09633 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc9P09633 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc9P09633 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc9P09633 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC17.01■□□□□ 0.31
Hoxc9P09633 Gm11930-201ENSMUST00000117788 190 ntBASIC17.01■□□□□ 0.31
Hoxc9P09633 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc9P09633 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC17.01■□□□□ 0.31
Hoxc9P09633 Gm15276-201ENSMUST00000145953 498 ntBASIC17.01■□□□□ 0.31
Hoxc9P09633 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Hoxc9P09633 Gm2260-201ENSMUST00000184965 657 ntBASIC17.01■□□□□ 0.31
Hoxc9P09633 Gm9445-201ENSMUST00000207454 1285 ntBASIC17.01■□□□□ 0.31
Hoxc9P09633 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc9P09633 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Hoxc9P09633 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc9P09633 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc9P09633 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc9P09633 AC123857.2-201ENSMUST00000225756 1582 ntBASIC17.01■□□□□ 0.31
Hoxc9P09633 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc9P09633 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc9P09633 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc9P09633 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc9P09633 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxc9P09633 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC17.01■□□□□ 0.31
Hoxc9P09633 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxc9P09633 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxc9P09633 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Hoxc9P09633 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxc9P09633 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hoxc9P09633 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17■□□□□ 0.31
Hoxc9P09633 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxc9P09633 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxc9P09633 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hoxc9P09633 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxc9P09633 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxc9P09633 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxc9P09633 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxc9P09633 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxc9P09633 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxc9P09633 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Hoxc9P09633 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Hoxc9P09633 Gm4760-201ENSMUST00000119663 1030 ntBASIC17■□□□□ 0.31
Hoxc9P09633 Gm12291-201ENSMUST00000121627 311 ntBASIC17■□□□□ 0.31
Hoxc9P09633 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC17■□□□□ 0.31
Hoxc9P09633 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxc9P09633 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Hoxc9P09633 Gm19931-201ENSMUST00000198920 368 ntBASIC17■□□□□ 0.31
Hoxc9P09633 Gm3786-201ENSMUST00000202659 378 ntBASIC17■□□□□ 0.31
Hoxc9P09633 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC17■□□□□ 0.31
Hoxc9P09633 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxc9P09633 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxc9P09633 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxc9P09633 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxc9P09633 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
Hoxc9P09633 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxc9P09633 Gm5989-201ENSMUST00000096092 2077 ntBASIC17■□□□□ 0.31
Hoxc9P09633 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17■□□□□ 0.31
Hoxc9P09633 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxc9P09633 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxc9P09633 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxc9P09633 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxc9P09633 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxc9P09633 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxc9P09633 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxc9P09633 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxc9P09633 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms