Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.01□□□□□ -0.17
TnfP06804 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.01□□□□□ -0.17
TnfP06804 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TnfP06804 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TnfP06804 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TnfP06804 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TnfP06804 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TnfP06804 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TnfP06804 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TnfP06804 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TnfP06804 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TnfP06804 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TnfP06804 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TnfP06804 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TnfP06804 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TnfP06804 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TnfP06804 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.01□□□□□ -0.17
TnfP06804 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Gm18244-201ENSMUST00000219747 1566 ntBASIC14□□□□□ -0.17
TnfP06804 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14□□□□□ -0.17
TnfP06804 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TnfP06804 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Acot6-202ENSMUST00000222921 3622 ntBASIC14□□□□□ -0.17
TnfP06804 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TnfP06804 Gm5466-201ENSMUST00000119395 1890 ntBASIC14□□□□□ -0.17
TnfP06804 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14□□□□□ -0.17
TnfP06804 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Mir874-201ENSMUST00000104769 76 ntBASIC14□□□□□ -0.17
TnfP06804 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Gm12363-201ENSMUST00000122250 668 ntBASIC14□□□□□ -0.17
TnfP06804 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14□□□□□ -0.17
TnfP06804 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Gm6222-202ENSMUST00000182143 629 ntBASIC14□□□□□ -0.17
TnfP06804 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14□□□□□ -0.17
TnfP06804 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14□□□□□ -0.17
TnfP06804 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14□□□□□ -0.17
TnfP06804 AC133598.1-201ENSMUST00000224327 660 ntBASIC14□□□□□ -0.17
TnfP06804 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TnfP06804 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14□□□□□ -0.17
TnfP06804 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TnfP06804 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.99□□□□□ -0.17
TnfP06804 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.99□□□□□ -0.17
TnfP06804 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.99□□□□□ -0.17
TnfP06804 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
TnfP06804 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.99□□□□□ -0.17
TnfP06804 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
TnfP06804 Gm16379-201ENSMUST00000161469 348 ntBASIC13.99□□□□□ -0.17
TnfP06804 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.99□□□□□ -0.17
TnfP06804 Gm8762-201ENSMUST00000193486 339 ntBASIC13.99□□□□□ -0.17
TnfP06804 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.99□□□□□ -0.17
TnfP06804 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.99□□□□□ -0.17
TnfP06804 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.99□□□□□ -0.17
TnfP06804 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TnfP06804 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TnfP06804 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TnfP06804 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms