Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04946 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04946 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04946 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04946 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04946 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04946 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04946 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04946 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
P04946 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.31□□□□□ -0.6
P04946 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.31□□□□□ -0.6
P04946 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
P04946 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
P04946 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.31□□□□□ -0.6
P04946 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
P04946 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
P04946 Gm11591-201ENSMUST00000120063 702 ntBASIC11.31□□□□□ -0.6
P04946 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.31□□□□□ -0.6
P04946 Gm17208-201ENSMUST00000168388 535 ntBASIC11.31□□□□□ -0.6
P04946 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Gm6222-202ENSMUST00000182143 629 ntBASIC11.31□□□□□ -0.6
P04946 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.31□□□□□ -0.6
P04946 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.31□□□□□ -0.6
P04946 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.31□□□□□ -0.6
P04946 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.31□□□□□ -0.6
P04946 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.31□□□□□ -0.6
P04946 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.31□□□□□ -0.6
P04946 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.31□□□□□ -0.6
P04946 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04946 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.3□□□□□ -0.6
P04946 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.3□□□□□ -0.6
P04946 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
P04946 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.3□□□□□ -0.6
P04946 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.3□□□□□ -0.6
P04946 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
P04946 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.3□□□□□ -0.6
P04946 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.3□□□□□ -0.6
P04946 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
P04946 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Gm43133-201ENSMUST00000197472 463 ntBASIC11.3□□□□□ -0.6
P04946 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.3□□□□□ -0.6
P04946 Gm43118-201ENSMUST00000199149 775 ntBASIC11.3□□□□□ -0.6
P04946 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.3□□□□□ -0.6
P04946 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.3□□□□□ -0.6
P04946 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.3□□□□□ -0.6
P04946 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.3□□□□□ -0.6
P04946 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
P04946 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04946 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms