Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lmx1bO88609 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Lmx1bO88609 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lmx1bO88609 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Lmx1bO88609 Gm13886-201ENSMUST00000117876 1183 ntBASIC12□□□□□ -0.49
Lmx1bO88609 Gm5687-201ENSMUST00000118252 640 ntBASIC12□□□□□ -0.49
Lmx1bO88609 Gm16177-201ENSMUST00000120728 718 ntBASIC12□□□□□ -0.49
Lmx1bO88609 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Lmx1bO88609 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12□□□□□ -0.49
Lmx1bO88609 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lmx1bO88609 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12□□□□□ -0.49
Lmx1bO88609 Gm8565-201ENSMUST00000183259 1014 ntBASIC12□□□□□ -0.49
Lmx1bO88609 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12□□□□□ -0.49
Lmx1bO88609 AC154595.3-201ENSMUST00000224579 384 ntBASIC12□□□□□ -0.49
Lmx1bO88609 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lmx1bO88609 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lmx1bO88609 Gm3695-201ENSMUST00000087222 1009 ntBASIC12□□□□□ -0.49
Lmx1bO88609 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lmx1bO88609 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lmx1bO88609 Gm9200-201ENSMUST00000118513 1354 ntBASIC12□□□□□ -0.49
Lmx1bO88609 Gm9755-201ENSMUST00000032981 1356 ntBASIC12□□□□□ -0.49
Lmx1bO88609 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lmx1bO88609 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lmx1bO88609 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lmx1bO88609 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lmx1bO88609 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lmx1bO88609 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lmx1bO88609 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Lmx1bO88609 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lmx1bO88609 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lmx1bO88609 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lmx1bO88609 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.99□□□□□ -0.49
Lmx1bO88609 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Lmx1bO88609 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lmx1bO88609 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.99□□□□□ -0.49
Lmx1bO88609 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.99□□□□□ -0.49
Lmx1bO88609 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.99□□□□□ -0.49
Lmx1bO88609 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Lmx1bO88609 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.99□□□□□ -0.49
Lmx1bO88609 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Gm13392-201ENSMUST00000117708 150 ntBASIC11.99□□□□□ -0.49
Lmx1bO88609 Gm12203-201ENSMUST00000118235 598 ntBASIC11.99□□□□□ -0.49
Lmx1bO88609 Gm12209-201ENSMUST00000120089 596 ntBASIC11.99□□□□□ -0.49
Lmx1bO88609 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.99□□□□□ -0.49
Lmx1bO88609 Gm27331-201ENSMUST00000183705 60 ntBASIC11.99□□□□□ -0.49
Lmx1bO88609 Gm37424-201ENSMUST00000191727 561 ntBASIC11.99□□□□□ -0.49
Lmx1bO88609 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.99□□□□□ -0.49
Lmx1bO88609 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Lmx1bO88609 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.99□□□□□ -0.49
Lmx1bO88609 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.99□□□□□ -0.49
Lmx1bO88609 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.99□□□□□ -0.49
Lmx1bO88609 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lmx1bO88609 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lmx1bO88609 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lmx1bO88609 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Lmx1bO88609 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
Lmx1bO88609 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lmx1bO88609 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lmx1bO88609 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lmx1bO88609 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.98□□□□□ -0.49
Lmx1bO88609 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lmx1bO88609 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.98□□□□□ -0.49
Lmx1bO88609 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.98□□□□□ -0.49
Lmx1bO88609 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lmx1bO88609 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lmx1bO88609 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lmx1bO88609 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lmx1bO88609 Snora78-201ENSMUST00000158630 128 ntBASIC11.98□□□□□ -0.49
Lmx1bO88609 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.98□□□□□ -0.49
Lmx1bO88609 Gm43818-201ENSMUST00000200605 466 ntBASIC11.98□□□□□ -0.49
Lmx1bO88609 Gm29705-201ENSMUST00000212598 474 ntBASIC11.98□□□□□ -0.49
Lmx1bO88609 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms