Protein–RNA interactions for Protein: O88255

Gm10509, Mszf57 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10509O88255 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Gm10509O88255 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Gm10509O88255 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Gm10509O88255 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Gm10509O88255 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm10509O88255 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Gm10509O88255 Gm29608-201ENSMUST00000190444 463 ntBASIC9.44□□□□□ -0.9
Gm10509O88255 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC9.44□□□□□ -0.9
Gm10509O88255 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC9.44□□□□□ -0.9
Gm10509O88255 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Gm10509O88255 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 AC132863.2-201ENSMUST00000226643 799 ntBASIC9.44□□□□□ -0.9
Gm10509O88255 AC154276.1-201ENSMUST00000228874 1299 ntBASIC9.44□□□□□ -0.9
Gm10509O88255 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Gm9025-201ENSMUST00000122415 1575 ntBASIC9.44□□□□□ -0.9
Gm10509O88255 AC113060.1-201ENSMUST00000225689 1573 ntBASIC9.44□□□□□ -0.9
Gm10509O88255 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC9.44□□□□□ -0.9
Gm10509O88255 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Gm10509O88255 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm10509O88255 AC154747.3-201ENSMUST00000224471 3470 ntBASIC9.44□□□□□ -0.9
Gm10509O88255 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Gm10509O88255 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10509O88255 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Gm10509O88255 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Gm10509O88255 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Gm11400-201ENSMUST00000120853 1214 ntBASIC9.43□□□□□ -0.9
Gm10509O88255 Gm14719-201ENSMUST00000121891 340 ntBASIC9.43□□□□□ -0.9
Gm10509O88255 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC9.43□□□□□ -0.9
Gm10509O88255 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
Gm10509O88255 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC9.43□□□□□ -0.9
Gm10509O88255 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Gm28760-201ENSMUST00000185995 736 ntBASIC9.43□□□□□ -0.9
Gm10509O88255 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Gm42550-201ENSMUST00000201553 960 ntBASIC9.43□□□□□ -0.9
Gm10509O88255 Gm44985-201ENSMUST00000206202 1016 ntBASIC9.43□□□□□ -0.9
Gm10509O88255 Gm44872-201ENSMUST00000207864 420 ntBASIC9.43□□□□□ -0.9
Gm10509O88255 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 AC132467.2-202ENSMUST00000227726 559 ntBASIC9.43□□□□□ -0.9
Gm10509O88255 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Gm10509O88255 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Gm10509O88255 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10509O88255 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms