Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Gm14859-201ENSMUST00000117752 357 ntBASIC10.43□□□□□ -0.74
Pde6dO55057 Gm6539-201ENSMUST00000119157 1064 ntBASIC10.43□□□□□ -0.74
Pde6dO55057 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC10.43□□□□□ -0.74
Pde6dO55057 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC10.43□□□□□ -0.74
Pde6dO55057 Gm33142-201ENSMUST00000193913 867 ntBASIC10.43□□□□□ -0.74
Pde6dO55057 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Pde6dO55057 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Pde6dO55057 Mir497b-201ENSMUST00000093601 125 ntBASIC10.43□□□□□ -0.74
Pde6dO55057 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Map1b-203ENSMUST00000223725 2669 ntBASIC10.43□□□□□ -0.74
Pde6dO55057 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Pde6dO55057 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.43□□□□□ -0.74
Pde6dO55057 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Pde6dO55057 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.43□□□□□ -0.74
Pde6dO55057 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pde6dO55057 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.42□□□□□ -0.74
Pde6dO55057 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Pde6dO55057 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Pde6dO55057 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.42□□□□□ -0.74
Pde6dO55057 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.42□□□□□ -0.74
Pde6dO55057 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Gm9385-201ENSMUST00000117563 472 ntBASIC10.42□□□□□ -0.74
Pde6dO55057 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC10.42□□□□□ -0.74
Pde6dO55057 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC10.42□□□□□ -0.74
Pde6dO55057 Gm43347-201ENSMUST00000200226 580 ntBASIC10.42□□□□□ -0.74
Pde6dO55057 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC10.42□□□□□ -0.74
Pde6dO55057 Gm18669-201ENSMUST00000216049 778 ntBASIC10.42□□□□□ -0.74
Pde6dO55057 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC10.42□□□□□ -0.74
Pde6dO55057 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.42□□□□□ -0.74
Pde6dO55057 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Pde6dO55057 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Pde6dO55057 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Pde6dO55057 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC10.42□□□□□ -0.74
Pde6dO55057 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.42□□□□□ -0.74
Pde6dO55057 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Pde6dO55057 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.42□□□□□ -0.74
Pde6dO55057 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pde6dO55057 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.41□□□□□ -0.74
Pde6dO55057 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Pde6dO55057 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Pde6dO55057 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Gm42934-201ENSMUST00000196920 1345 ntBASIC10.41□□□□□ -0.74
Pde6dO55057 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.41□□□□□ -0.74
Pde6dO55057 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC10.41□□□□□ -0.74
Pde6dO55057 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Gm6222-201ENSMUST00000120787 396 ntBASIC10.41□□□□□ -0.74
Pde6dO55057 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Pde6dO55057 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Pde6dO55057 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC10.41□□□□□ -0.74
Pde6dO55057 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Pde6dO55057 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms