Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
BckdkO55028 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BckdkO55028 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BckdkO55028 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BckdkO55028 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.29□□□□□ -0.44
BckdkO55028 Gm15371-201ENSMUST00000117057 784 ntBASIC12.29□□□□□ -0.44
BckdkO55028 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.29□□□□□ -0.44
BckdkO55028 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BckdkO55028 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.29□□□□□ -0.44
BckdkO55028 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.29□□□□□ -0.44
BckdkO55028 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
BckdkO55028 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.29□□□□□ -0.44
BckdkO55028 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.29□□□□□ -0.44
BckdkO55028 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.29□□□□□ -0.44
BckdkO55028 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
BckdkO55028 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BckdkO55028 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BckdkO55028 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BckdkO55028 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
BckdkO55028 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.29□□□□□ -0.44
BckdkO55028 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BckdkO55028 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
BckdkO55028 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BckdkO55028 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BckdkO55028 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.29□□□□□ -0.44
BckdkO55028 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BckdkO55028 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.29□□□□□ -0.44
BckdkO55028 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
BckdkO55028 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
BckdkO55028 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
BckdkO55028 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.29□□□□□ -0.44
BckdkO55028 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.29□□□□□ -0.44
BckdkO55028 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.29□□□□□ -0.44
BckdkO55028 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BckdkO55028 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
BckdkO55028 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.28□□□□□ -0.44
BckdkO55028 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
BckdkO55028 Gm12485-201ENSMUST00000119641 291 ntBASIC12.28□□□□□ -0.44
BckdkO55028 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Gm15429-201ENSMUST00000151268 798 ntBASIC12.28□□□□□ -0.44
BckdkO55028 Gm6244-201ENSMUST00000178732 841 ntBASIC12.28□□□□□ -0.44
BckdkO55028 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.28□□□□□ -0.44
BckdkO55028 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.28□□□□□ -0.44
BckdkO55028 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
BckdkO55028 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.28□□□□□ -0.44
BckdkO55028 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
BckdkO55028 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.28□□□□□ -0.44
BckdkO55028 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.28□□□□□ -0.44
BckdkO55028 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
BckdkO55028 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
BckdkO55028 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
BckdkO55028 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.28□□□□□ -0.44
BckdkO55028 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BckdkO55028 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
BckdkO55028 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
BckdkO55028 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
BckdkO55028 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
BckdkO55028 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
BckdkO55028 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
BckdkO55028 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
BckdkO55028 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.27□□□□□ -0.44
BckdkO55028 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
BckdkO55028 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
BckdkO55028 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
BckdkO55028 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
BckdkO55028 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.27□□□□□ -0.45
BckdkO55028 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.27□□□□□ -0.45
BckdkO55028 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.27□□□□□ -0.45
BckdkO55028 Gm26464-201ENSMUST00000157094 305 ntBASIC12.27□□□□□ -0.45
BckdkO55028 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
BckdkO55028 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.27□□□□□ -0.45
BckdkO55028 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.27□□□□□ -0.45
BckdkO55028 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms