Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Matn3O35701 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Matn3O35701 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Matn3O35701 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Matn3O35701 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Matn3O35701 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.01□□□□□ -0.49
Matn3O35701 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Matn3O35701 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Matn3O35701 Gm6973-201ENSMUST00000117080 721 ntBASIC12.01□□□□□ -0.49
Matn3O35701 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.01□□□□□ -0.49
Matn3O35701 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.01□□□□□ -0.49
Matn3O35701 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.01□□□□□ -0.49
Matn3O35701 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.01□□□□□ -0.49
Matn3O35701 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Matn3O35701 Gm7063-201ENSMUST00000186840 981 ntBASIC12.01□□□□□ -0.49
Matn3O35701 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.01□□□□□ -0.49
Matn3O35701 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.01□□□□□ -0.49
Matn3O35701 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Matn3O35701 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Matn3O35701 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.01□□□□□ -0.49
Matn3O35701 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Matn3O35701 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Matn3O35701 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Matn3O35701 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn3O35701 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Matn3O35701 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12□□□□□ -0.49
Matn3O35701 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Matn3O35701 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Matn3O35701 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Matn3O35701 Gm42706-201ENSMUST00000199733 1910 ntBASIC12□□□□□ -0.49
Matn3O35701 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Matn3O35701 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Matn3O35701 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12□□□□□ -0.49
Matn3O35701 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Matn3O35701 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Matn3O35701 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Matn3O35701 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Matn3O35701 Gm15427-201ENSMUST00000117288 531 ntBASIC12□□□□□ -0.49
Matn3O35701 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12□□□□□ -0.49
Matn3O35701 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Matn3O35701 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12□□□□□ -0.49
Matn3O35701 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Matn3O35701 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12□□□□□ -0.49
Matn3O35701 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12□□□□□ -0.49
Matn3O35701 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12□□□□□ -0.49
Matn3O35701 Gm45841-201ENSMUST00000207700 164 ntBASIC12□□□□□ -0.49
Matn3O35701 Gm45612-201ENSMUST00000211320 160 ntBASIC12□□□□□ -0.49
Matn3O35701 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12□□□□□ -0.49
Matn3O35701 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12□□□□□ -0.49
Matn3O35701 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12□□□□□ -0.49
Matn3O35701 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Matn3O35701 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Matn3O35701 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Matn3O35701 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Matn3O35701 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Matn3O35701 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12□□□□□ -0.49
Matn3O35701 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Matn3O35701 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Matn3O35701 Gm1995-201ENSMUST00000220838 2602 ntBASIC12□□□□□ -0.49
Matn3O35701 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Matn3O35701 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12□□□□□ -0.49
Matn3O35701 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Matn3O35701 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Matn3O35701 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Matn3O35701 Gm5466-201ENSMUST00000119395 1890 ntBASIC12□□□□□ -0.49
Matn3O35701 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Matn3O35701 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Matn3O35701 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Matn3O35701 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Matn3O35701 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Matn3O35701 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms