Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Gm14822-201ENSMUST00000122247 291 ntBASIC14.87□□□□□ -0.03
Stx1aO35526 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.87□□□□□ -0.03
Stx1aO35526 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Stx1aO35526 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.87□□□□□ -0.03
Stx1aO35526 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.87□□□□□ -0.03
Stx1aO35526 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Stx1aO35526 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.87□□□□□ -0.03
Stx1aO35526 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.87□□□□□ -0.03
Stx1aO35526 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.87□□□□□ -0.03
Stx1aO35526 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Stx1aO35526 Gm44771-201ENSMUST00000206975 626 ntBASIC14.87□□□□□ -0.03
Stx1aO35526 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Stx1aO35526 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Stx1aO35526 Chchd1-203ENSMUST00000224633 557 ntBASIC14.87□□□□□ -0.03
Stx1aO35526 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.87□□□□□ -0.03
Stx1aO35526 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.87□□□□□ -0.03
Stx1aO35526 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Stx1aO35526 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Stx1aO35526 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Stx1aO35526 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Stx1aO35526 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Stx1aO35526 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Stx1aO35526 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Stx1aO35526 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Stx1aO35526 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.87□□□□□ -0.03
Stx1aO35526 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Stx1aO35526 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Stx1aO35526 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Stx1aO35526 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Stx1aO35526 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Stx1aO35526 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Stx1aO35526 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Stx1aO35526 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Stx1aO35526 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Stx1aO35526 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.86□□□□□ -0.03
Stx1aO35526 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Stx1aO35526 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Stx1aO35526 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Stx1aO35526 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Stx1aO35526 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Stx1aO35526 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Stx1aO35526 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Stx1aO35526 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.86□□□□□ -0.03
Stx1aO35526 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.86□□□□□ -0.03
Stx1aO35526 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Stx1aO35526 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.86□□□□□ -0.03
Stx1aO35526 Gm27680-201ENSMUST00000184192 160 ntBASIC14.86□□□□□ -0.03
Stx1aO35526 Gm27321-201ENSMUST00000185021 205 ntBASIC14.86□□□□□ -0.03
Stx1aO35526 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.86□□□□□ -0.03
Stx1aO35526 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Stx1aO35526 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.86□□□□□ -0.03
Stx1aO35526 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.86□□□□□ -0.03
Stx1aO35526 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Stx1aO35526 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Stx1aO35526 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Stx1aO35526 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Stx1aO35526 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Stx1aO35526 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Stx1aO35526 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Stx1aO35526 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Stx1aO35526 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Stx1aO35526 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Stx1aO35526 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stx1aO35526 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stx1aO35526 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stx1aO35526 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.85□□□□□ -0.03
Stx1aO35526 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stx1aO35526 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stx1aO35526 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.85□□□□□ -0.03
Stx1aO35526 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Stx1aO35526 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Stx1aO35526 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.85□□□□□ -0.03
Stx1aO35526 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.85□□□□□ -0.03
Stx1aO35526 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Stx1aO35526 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stx1aO35526 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Stx1aO35526 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Stx1aO35526 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stx1aO35526 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Stx1aO35526 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Stx1aO35526 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.85□□□□□ -0.03
Stx1aO35526 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stx1aO35526 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stx1aO35526 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.85□□□□□ -0.03
Stx1aO35526 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stx1aO35526 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.85□□□□□ -0.03
Stx1aO35526 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stx1aO35526 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stx1aO35526 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stx1aO35526 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Stx1aO35526 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Stx1aO35526 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Stx1aO35526 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Stx1aO35526 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stx1aO35526 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stx1aO35526 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stx1aO35526 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stx1aO35526 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stx1aO35526 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Stx1aO35526 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms