Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.74■□□□□ 0.11
Hdac1O09106 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac1O09106 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac1O09106 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.74■□□□□ 0.11
Hdac1O09106 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC15.74■□□□□ 0.11
Hdac1O09106 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Hdac1O09106 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac1O09106 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac1O09106 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac1O09106 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac1O09106 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac1O09106 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac1O09106 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac1O09106 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac1O09106 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Hdac1O09106 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac1O09106 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac1O09106 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac1O09106 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac1O09106 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.73■□□□□ 0.11
Hdac1O09106 Gm11524-201ENSMUST00000119349 807 ntBASIC15.73■□□□□ 0.11
Hdac1O09106 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.73■□□□□ 0.11
Hdac1O09106 Gm27702-201ENSMUST00000184512 56 ntBASIC15.73■□□□□ 0.11
Hdac1O09106 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.73■□□□□ 0.11
Hdac1O09106 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.73■□□□□ 0.11
Hdac1O09106 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.73■□□□□ 0.11
Hdac1O09106 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac1O09106 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac1O09106 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac1O09106 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Hdac1O09106 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac1O09106 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC15.73■□□□□ 0.11
Hdac1O09106 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac1O09106 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac1O09106 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac1O09106 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac1O09106 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac1O09106 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac1O09106 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac1O09106 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Hdac1O09106 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac1O09106 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.73■□□□□ 0.11
Hdac1O09106 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac1O09106 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac1O09106 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Hdac1O09106 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac1O09106 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Hdac1O09106 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Hdac1O09106 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.72■□□□□ 0.11
Hdac1O09106 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Hdac1O09106 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Gm7049-201ENSMUST00000223520 1712 ntBASIC15.72■□□□□ 0.11
Hdac1O09106 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Hdac1O09106 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Gm14701-201ENSMUST00000117156 348 ntBASIC15.72■□□□□ 0.11
Hdac1O09106 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Gm6447-201ENSMUST00000118905 835 ntBASIC15.72■□□□□ 0.11
Hdac1O09106 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
Hdac1O09106 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Hdac1O09106 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.72■□□□□ 0.11
Hdac1O09106 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.72■□□□□ 0.11
Hdac1O09106 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.72■□□□□ 0.11
Hdac1O09106 Gm2213-201ENSMUST00000197485 688 ntBASIC15.72■□□□□ 0.11
Hdac1O09106 Gm5279-201ENSMUST00000199575 745 ntBASIC15.72■□□□□ 0.11
Hdac1O09106 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.72■□□□□ 0.11
Hdac1O09106 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.72■□□□□ 0.11
Hdac1O09106 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.72■□□□□ 0.11
Hdac1O09106 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.72■□□□□ 0.11
Hdac1O09106 Gm45266-201ENSMUST00000210111 2173 ntBASIC15.72■□□□□ 0.11
Hdac1O09106 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac1O09106 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Hdac1O09106 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac1O09106 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac1O09106 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac1O09106 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac1O09106 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac1O09106 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac1O09106 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms