Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.76□□□□□ -0.21
Ebf3O08791 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ebf3O08791 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.76□□□□□ -0.21
Ebf3O08791 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ebf3O08791 Gm2445-201ENSMUST00000182798 989 ntBASIC13.76□□□□□ -0.21
Ebf3O08791 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Gm37008-201ENSMUST00000195712 319 ntBASIC13.76□□□□□ -0.21
Ebf3O08791 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.76□□□□□ -0.21
Ebf3O08791 Gm19309-201ENSMUST00000218295 205 ntBASIC13.76□□□□□ -0.21
Ebf3O08791 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ebf3O08791 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.76□□□□□ -0.21
Ebf3O08791 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.76□□□□□ -0.21
Ebf3O08791 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf3O08791 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ebf3O08791 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ebf3O08791 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ebf3O08791 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Ebf3O08791 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Ebf3O08791 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.75□□□□□ -0.21
Ebf3O08791 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.75□□□□□ -0.21
Ebf3O08791 Gm38002-201ENSMUST00000193255 180 ntBASIC13.75□□□□□ -0.21
Ebf3O08791 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ebf3O08791 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.75□□□□□ -0.21
Ebf3O08791 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Ebf3O08791 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf3O08791 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.74□□□□□ -0.21
Ebf3O08791 Gm22018-201ENSMUST00000104357 131 ntBASIC13.74□□□□□ -0.21
Ebf3O08791 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.74□□□□□ -0.21
Ebf3O08791 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.74□□□□□ -0.21
Ebf3O08791 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.74□□□□□ -0.21
Ebf3O08791 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.74□□□□□ -0.21
Ebf3O08791 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.74□□□□□ -0.21
Ebf3O08791 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms