Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Gm12314-201ENSMUST00000118104 538 ntBASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Gm8913-201ENSMUST00000209491 641 ntBASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC19.69■□□□□ 0.74
Pcf11G3X9Z4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcf11G3X9Z4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Gm13813-201ENSMUST00000120998 787 ntBASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Gstp-ps-201ENSMUST00000195526 631 ntBASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 AC154222.2-201ENSMUST00000225848 607 ntBASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC19.67■□□□□ 0.74
Pcf11G3X9Z4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Gm14999-201ENSMUST00000121039 624 ntBASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Gzmn-202ENSMUST00000225535 989 ntBASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Gm43908-201ENSMUST00000205074 1472 ntBASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Pcf11G3X9Z4 Gm15703-201ENSMUST00000120250 880 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms