Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Gm15371-201ENSMUST00000117057 784 ntBASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chrna9G3X8Z7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Gm37917-201ENSMUST00000194711 392 ntBASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chrna9G3X8Z7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Gm7488-201ENSMUST00000117148 684 ntBASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Gm12859-201ENSMUST00000117834 427 ntBASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Gm15429-201ENSMUST00000151268 798 ntBASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Itm2b-204ENSMUST00000228637 783 ntBASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chrna9G3X8Z7 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chrna9G3X8Z7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chrna9G3X8Z7 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms