Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ube4aE9Q735 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Gm44207-201ENSMUST00000204568 1424 ntBASIC15.8■□□□□ 0.12
Ube4aE9Q735 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Gm6082-201ENSMUST00000215204 454 ntBASIC15.8■□□□□ 0.12
Ube4aE9Q735 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube4aE9Q735 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.79■□□□□ 0.12
Ube4aE9Q735 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Gm29199-201ENSMUST00000187766 775 ntBASIC15.79■□□□□ 0.12
Ube4aE9Q735 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4aE9Q735 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Ube4aE9Q735 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.78■□□□□ 0.12
Ube4aE9Q735 Gm38092-201ENSMUST00000195600 653 ntBASIC15.78■□□□□ 0.12
Ube4aE9Q735 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Gm30285-201ENSMUST00000214614 422 ntBASIC15.78■□□□□ 0.12
Ube4aE9Q735 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.78■□□□□ 0.12
Ube4aE9Q735 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ube4aE9Q735 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4aE9Q735 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms