Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm12887B1AVM1 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Gm13015-201ENSMUST00000118674 204 ntBASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Gm13385-201ENSMUST00000121089 220 ntBASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Gm17971-201ENSMUST00000190239 806 ntBASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Gm21362-201ENSMUST00000194272 928 ntBASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Gm18049-201ENSMUST00000208909 581 ntBASIC10.68□□□□□ -0.7
Gm12887B1AVM1 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12887B1AVM1 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Gm17271-201ENSMUST00000165535 355 ntBASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Gm33320-201ENSMUST00000192232 530 ntBASIC10.67□□□□□ -0.7
Gm12887B1AVM1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Dupd1-202ENSMUST00000224735 548 ntBASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms