Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Gm3854A0A1B0GSS6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm3854A0A1B0GSS6 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.21□□□□□ -0.3
Gm3854A0A1B0GSS6 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm3854A0A1B0GSS6 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Gm3854A0A1B0GSS6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Gm3854A0A1B0GSS6 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.21□□□□□ -0.3
Gm3854A0A1B0GSS6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gm3854A0A1B0GSS6 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm12502-201ENSMUST00000120197 444 ntBASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gm3854A0A1B0GSS6 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm10434-201ENSMUST00000101158 471 ntBASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm24548-201ENSMUST00000158650 108 ntBASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm26461-201ENSMUST00000175064 290 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms