Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Gm12403-201ENSMUST00000121384 959 ntBASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Mir7221-201ENSMUST00000184009 72 ntBASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Gm27838-201ENSMUST00000184829 128 ntBASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Gm38144-201ENSMUST00000192790 465 ntBASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc194A0A140LIT1 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Mir7684-201ENSMUST00000183858 60 ntBASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Mir8102-201ENSMUST00000184148 139 ntBASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc194A0A140LIT1 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms