Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm18983-201ENSMUST00000222884 2729 ntBASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Mir7221-201ENSMUST00000184009 72 ntBASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm43365-201ENSMUST00000196522 2106 ntBASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm45011-201ENSMUST00000207620 2297 ntBASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Mir698-201ENSMUST00000102164 109 ntBASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm6728-201ENSMUST00000178117 1065 ntBASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm27357-201ENSMUST00000183754 135 ntBASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm37714-201ENSMUST00000194742 342 ntBASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Mir497b-201ENSMUST00000093601 125 ntBASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Igkv8-27A0A0G2JF28 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Igkv8-27A0A0G2JF28 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms