Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Gm12485-201ENSMUST00000119641 291 ntBASIC10.85□□□□□ -0.67
Trav18A0A075B656 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Mir7221-201ENSMUST00000184009 72 ntBASIC10.85□□□□□ -0.67
Trav18A0A075B656 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC10.85□□□□□ -0.67
Trav18A0A075B656 AC165157.4-201ENSMUST00000220587 139 ntBASIC10.85□□□□□ -0.67
Trav18A0A075B656 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.85□□□□□ -0.67
Trav18A0A075B656 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav18A0A075B656 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Gm25927-201ENSMUST00000175058 117 ntBASIC10.84□□□□□ -0.67
Trav18A0A075B656 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav18A0A075B656 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav18A0A075B656 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.84□□□□□ -0.67
Trav18A0A075B656 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.84□□□□□ -0.67
Trav18A0A075B656 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav18A0A075B656 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.67
Trav18A0A075B656 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.83□□□□□ -0.68
Trav18A0A075B656 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms