Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Trav8-1A0A075B641 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Map1b-203ENSMUST00000223725 2669 ntBASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav8-1A0A075B641 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Gm7862-201ENSMUST00000121461 292 ntBASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Zkscan14-203ENSMUST00000198959 2243 ntBASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav8-1A0A075B641 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Gm12882-201ENSMUST00000121696 517 ntBASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Gm10060-201ENSMUST00000212002 111 ntBASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav8-1A0A075B641 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms