Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.18□□□□□ -0.78
PdfS4R2K0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
PdfS4R2K0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
PdfS4R2K0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
PdfS4R2K0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.17□□□□□ -0.78
PdfS4R2K0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
PdfS4R2K0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.17□□□□□ -0.78
PdfS4R2K0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
PdfS4R2K0 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.17□□□□□ -0.78
PdfS4R2K0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Gm13616-201ENSMUST00000120600 222 ntBASIC10.17□□□□□ -0.78
PdfS4R2K0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.17□□□□□ -0.78
PdfS4R2K0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC10.17□□□□□ -0.78
PdfS4R2K0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.17□□□□□ -0.78
PdfS4R2K0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC10.17□□□□□ -0.78
PdfS4R2K0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.17□□□□□ -0.78
PdfS4R2K0 AC131187.1-201ENSMUST00000224567 809 ntBASIC10.17□□□□□ -0.78
PdfS4R2K0 CT030704.2-201ENSMUST00000228887 494 ntBASIC10.17□□□□□ -0.78
PdfS4R2K0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
PdfS4R2K0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
PdfS4R2K0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
PdfS4R2K0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
PdfS4R2K0 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PdfS4R2K0 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
PdfS4R2K0 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC10.16□□□□□ -0.78
PdfS4R2K0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
PdfS4R2K0 Gm6018-201ENSMUST00000216090 1306 ntBASIC10.16□□□□□ -0.78
PdfS4R2K0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC10.16□□□□□ -0.78
PdfS4R2K0 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
PdfS4R2K0 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC10.16□□□□□ -0.78
PdfS4R2K0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC10.16□□□□□ -0.78
PdfS4R2K0 Gm6539-201ENSMUST00000119157 1064 ntBASIC10.16□□□□□ -0.78
PdfS4R2K0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC10.16□□□□□ -0.78
PdfS4R2K0 Mir6956-201ENSMUST00000183598 62 ntBASIC10.16□□□□□ -0.78
PdfS4R2K0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
PdfS4R2K0 Gm18049-201ENSMUST00000208909 581 ntBASIC10.16□□□□□ -0.78
PdfS4R2K0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.16□□□□□ -0.78
PdfS4R2K0 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
PdfS4R2K0 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Gm28386-201ENSMUST00000189147 1849 ntBASIC10.16□□□□□ -0.78
PdfS4R2K0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
PdfS4R2K0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms