Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm6983-201ENSMUST00000214912 628 ntBASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb2S4R1M3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Gm44397-201ENSMUST00000195950 113 ntBASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Gm15823-201ENSMUST00000064305 670 ntBASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb2S4R1M3 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Gm6447-201ENSMUST00000118905 835 ntBASIC13.24□□□□□ -0.29
H2afb2S4R1M3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Gm19931-201ENSMUST00000198920 368 ntBASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb2S4R1M3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms