Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.95□□□□□ -0.5
H2afb3S4R1G7 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.95□□□□□ -0.5
H2afb3S4R1G7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Gm15678-201ENSMUST00000117573 960 ntBASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Gm17330-201ENSMUST00000221047 165 ntBASIC11.94□□□□□ -0.5
H2afb3S4R1G7 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
H2afb3S4R1G7 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Gm13223-201ENSMUST00000118609 747 ntBASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms