Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcb1Q9Z0H3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Gm19931-201ENSMUST00000198920 368 ntBASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Smarcb1Q9Z0H3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcb1Q9Z0H3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcb1Q9Z0H3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcb1Q9Z0H3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Smarcb1Q9Z0H3 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.71□□□□□ -0.22
Smarcb1Q9Z0H3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcb1Q9Z0H3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcb1Q9Z0H3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Mir1247-201ENSMUST00000116706 82 ntBASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Gm43179-201ENSMUST00000198797 275 ntBASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Smarcb1Q9Z0H3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms