Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClcnkaQ9WUB7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Gm12341-201ENSMUST00000119724 503 ntBASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClcnkaQ9WUB7 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Gm12403-201ENSMUST00000121384 959 ntBASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Mir6392-201ENSMUST00000184924 108 ntBASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Gm18624-201ENSMUST00000220966 658 ntBASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.22□□□□□ -0.45
ClcnkaQ9WUB7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms