Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Gm3809-201ENSMUST00000180973 1006 ntBASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 AC121598.1-201ENSMUST00000228224 1019 ntBASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn5Q9WU28 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 CT030684.1-201ENSMUST00000227292 914 ntBASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn5Q9WU28 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn5Q9WU28 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
Pfdn5Q9WU28 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn5Q9WU28 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn5Q9WU28 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn5Q9WU28 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn5Q9WU28 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn5Q9WU28 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn5Q9WU28 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn5Q9WU28 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn5Q9WU28 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn5Q9WU28 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 192 ms