Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Gm12203-201ENSMUST00000118235 598 ntBASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Gm12209-201ENSMUST00000120089 596 ntBASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Gm37922-201ENSMUST00000195596 455 ntBASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.73□□□□□ -0.37
Upk3aQ9JKX8 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Gm22331-201ENSMUST00000158066 136 ntBASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Gm27847-201ENSMUST00000183711 107 ntBASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Gm27375-201ENSMUST00000183799 107 ntBASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Gm28693-202ENSMUST00000190758 331 ntBASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Gm37497-201ENSMUST00000195830 798 ntBASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Gm6091-201ENSMUST00000098307 165 ntBASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Upk3aQ9JKX8 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Gm8805-201ENSMUST00000117848 313 ntBASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms