Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.83□□□□□ -0.04
Cacna1fQ9JIS7 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.83□□□□□ -0.04
Cacna1fQ9JIS7 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.83□□□□□ -0.04
Cacna1fQ9JIS7 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1fQ9JIS7 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1fQ9JIS7 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1fQ9JIS7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1fQ9JIS7 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1fQ9JIS7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1fQ9JIS7 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1fQ9JIS7 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.83□□□□□ -0.04
Cacna1fQ9JIS7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1fQ9JIS7 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.83□□□□□ -0.04
Cacna1fQ9JIS7 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1fQ9JIS7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Gm14921-201ENSMUST00000118643 908 ntBASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Gm22334-201ENSMUST00000158070 133 ntBASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1fQ9JIS7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Gm27023-201ENSMUST00000182372 285 ntBASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Gm29787-201ENSMUST00000222129 849 ntBASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1fQ9JIS7 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.8□□□□□ -0.04
Cacna1fQ9JIS7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1fQ9JIS7 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1fQ9JIS7 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1fQ9JIS7 Gm13315-201ENSMUST00000120376 991 ntBASIC14.8□□□□□ -0.04
Cacna1fQ9JIS7 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Cacna1fQ9JIS7 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Cacna1fQ9JIS7 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.8□□□□□ -0.04
Cacna1fQ9JIS7 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1fQ9JIS7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cacna1fQ9JIS7 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1fQ9JIS7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1fQ9JIS7 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1fQ9JIS7 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1fQ9JIS7 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1fQ9JIS7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1fQ9JIS7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cacna1fQ9JIS7 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms