Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Gm17808-201ENSMUST00000200859 894 ntBASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Gm7787-201ENSMUST00000216858 688 ntBASIC10.57□□□□□ -0.72
Smco4Q9JIS3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco4Q9JIS3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 AC154471.1-201ENSMUST00000224418 436 ntBASIC10.56□□□□□ -0.72
Smco4Q9JIS3 CT030704.2-201ENSMUST00000228887 494 ntBASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco4Q9JIS3 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms