Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Gm25116-201ENSMUST00000157191 122 ntBASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim39Q9ESN2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Gm12585-201ENSMUST00000117307 290 ntBASIC12.43□□□□□ -0.42
Trim39Q9ESN2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim39Q9ESN2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Gm12151-201ENSMUST00000121374 290 ntBASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Gm4804-201ENSMUST00000182234 999 ntBASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Gm27306-201ENSMUST00000183970 107 ntBASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Gm27989-201ENSMUST00000184721 107 ntBASIC12.42□□□□□ -0.42
Trim39Q9ESN2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.42□□□□□ -0.42
Trim39Q9ESN2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms