Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Gm14127-201ENSMUST00000117906 678 ntBASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.18□□□□□ -0.3
Tubb3Q9ERD7 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Gm15240-201ENSMUST00000118156 720 ntBASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Gm13385-201ENSMUST00000121089 220 ntBASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tubb3Q9ERD7 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Gm43433-201ENSMUST00000196573 481 ntBASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Gm18307-201ENSMUST00000206864 949 ntBASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms