Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-4Q9EQM3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Nkx2-4Q9EQM3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-4Q9EQM3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-4Q9EQM3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-4Q9EQM3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-4Q9EQM3 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Nkx2-4Q9EQM3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-4Q9EQM3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Nkx2-4Q9EQM3 Snord83b-201ENSMUST00000104546 94 ntBASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Gm23699-201ENSMUST00000158835 135 ntBASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Gm44651-201ENSMUST00000207343 372 ntBASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Gm45224-201ENSMUST00000208203 414 ntBASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Gm8712-201ENSMUST00000221090 701 ntBASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.52□□□□□ -0.25
Nkx2-4Q9EQM3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Gm13996-201ENSMUST00000118456 430 ntBASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Gm11978-201ENSMUST00000122315 466 ntBASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Gm44545-201ENSMUST00000208262 746 ntBASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nkx2-4Q9EQM3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 Gm8566-201ENSMUST00000120174 465 ntBASIC13.5□□□□□ -0.25
Nkx2-4Q9EQM3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms