Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Cdc40Q9DC48 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Gm12928-201ENSMUST00000117115 573 ntBASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cdc40Q9DC48 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.31□□□□□ -0.44
Cdc40Q9DC48 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdc40Q9DC48 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms