Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.09□□□□□ -0.47
Hmg20aQ9DC33 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmg20aQ9DC33 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Hmg20aQ9DC33 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hmg20aQ9DC33 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmg20aQ9DC33 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmg20aQ9DC33 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmg20aQ9DC33 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmg20aQ9DC33 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Hmg20aQ9DC33 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmg20aQ9DC33 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmg20aQ9DC33 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hmg20aQ9DC33 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hmg20aQ9DC33 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.08□□□□□ -0.47
Hmg20aQ9DC33 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Gm9385-201ENSMUST00000117563 472 ntBASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmg20aQ9DC33 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmg20aQ9DC33 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmg20aQ9DC33 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmg20aQ9DC33 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.06□□□□□ -0.48
Hmg20aQ9DC33 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hmg20aQ9DC33 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmg20aQ9DC33 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmg20aQ9DC33 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmg20aQ9DC33 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmg20aQ9DC33 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Hmg20aQ9DC33 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Hmg20aQ9DC33 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmg20aQ9DC33 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hmg20aQ9DC33 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.06□□□□□ -0.48
Hmg20aQ9DC33 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmg20aQ9DC33 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmg20aQ9DC33 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.06□□□□□ -0.48
Hmg20aQ9DC33 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.06□□□□□ -0.48
Hmg20aQ9DC33 Gm15483-201ENSMUST00000120338 456 ntBASIC12.06□□□□□ -0.48
Hmg20aQ9DC33 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.06□□□□□ -0.48
Hmg20aQ9DC33 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms