Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC17.42■□□□□ 0.38
U2af1Q9D883 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
U2af1Q9D883 Gm43423-201ENSMUST00000198390 2094 ntBASIC17.41■□□□□ 0.38
U2af1Q9D883 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
U2af1Q9D883 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
U2af1Q9D883 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC17.41■□□□□ 0.38
U2af1Q9D883 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC17.41■□□□□ 0.38
U2af1Q9D883 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
U2af1Q9D883 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
U2af1Q9D883 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
U2af1Q9D883 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.41■□□□□ 0.38
U2af1Q9D883 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
U2af1Q9D883 AC134254.1-201ENSMUST00000221362 167 ntBASIC17.41■□□□□ 0.38
U2af1Q9D883 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
U2af1Q9D883 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
U2af1Q9D883 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
U2af1Q9D883 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
U2af1Q9D883 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
U2af1Q9D883 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
U2af1Q9D883 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
U2af1Q9D883 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
U2af1Q9D883 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
U2af1Q9D883 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
U2af1Q9D883 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
U2af1Q9D883 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
U2af1Q9D883 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
U2af1Q9D883 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
U2af1Q9D883 Gm7553-201ENSMUST00000185805 1426 ntBASIC17.4■□□□□ 0.38
U2af1Q9D883 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
U2af1Q9D883 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
U2af1Q9D883 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
U2af1Q9D883 Gm12384-201ENSMUST00000119228 919 ntBASIC17.4■□□□□ 0.38
U2af1Q9D883 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC17.4■□□□□ 0.38
U2af1Q9D883 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
U2af1Q9D883 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC17.4■□□□□ 0.38
U2af1Q9D883 AC153962.4-201ENSMUST00000217878 242 ntBASIC17.4■□□□□ 0.38
U2af1Q9D883 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
U2af1Q9D883 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
U2af1Q9D883 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
U2af1Q9D883 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
U2af1Q9D883 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
U2af1Q9D883 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
U2af1Q9D883 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
U2af1Q9D883 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
U2af1Q9D883 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
U2af1Q9D883 Gm14608-201ENSMUST00000120030 1553 ntBASIC17.4■□□□□ 0.38
U2af1Q9D883 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
U2af1Q9D883 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
U2af1Q9D883 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
U2af1Q9D883 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
U2af1Q9D883 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
U2af1Q9D883 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
U2af1Q9D883 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
U2af1Q9D883 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
U2af1Q9D883 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
U2af1Q9D883 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
U2af1Q9D883 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
U2af1Q9D883 Gm1335-201ENSMUST00000121653 386 ntBASIC17.39■□□□□ 0.37
U2af1Q9D883 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC17.39■□□□□ 0.37
U2af1Q9D883 Gm27682-201ENSMUST00000183930 110 ntBASIC17.39■□□□□ 0.37
U2af1Q9D883 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
U2af1Q9D883 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC17.39■□□□□ 0.37
U2af1Q9D883 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
U2af1Q9D883 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
U2af1Q9D883 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
U2af1Q9D883 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
U2af1Q9D883 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
U2af1Q9D883 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
U2af1Q9D883 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
U2af1Q9D883 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC17.39■□□□□ 0.37
U2af1Q9D883 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
U2af1Q9D883 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
U2af1Q9D883 Gm10339-203ENSMUST00000225409 1671 ntBASIC17.39■□□□□ 0.37
U2af1Q9D883 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
U2af1Q9D883 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
U2af1Q9D883 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17.38■□□□□ 0.37
U2af1Q9D883 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
U2af1Q9D883 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
U2af1Q9D883 Gm5989-201ENSMUST00000096092 2077 ntBASIC17.38■□□□□ 0.37
U2af1Q9D883 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
U2af1Q9D883 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
U2af1Q9D883 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
U2af1Q9D883 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
U2af1Q9D883 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
U2af1Q9D883 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
U2af1Q9D883 Gm11978-201ENSMUST00000122315 466 ntBASIC17.38■□□□□ 0.37
U2af1Q9D883 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
U2af1Q9D883 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC17.38■□□□□ 0.37
U2af1Q9D883 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
U2af1Q9D883 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
U2af1Q9D883 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
U2af1Q9D883 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC17.38■□□□□ 0.37
U2af1Q9D883 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.38■□□□□ 0.37
U2af1Q9D883 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
U2af1Q9D883 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
U2af1Q9D883 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
U2af1Q9D883 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
U2af1Q9D883 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
U2af1Q9D883 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
U2af1Q9D883 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms