Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Gm14494-201ENSMUST00000118786 435 ntBASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Gm15467-201ENSMUST00000120582 445 ntBASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Mir1895-201ENSMUST00000122615 79 ntBASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Gm8927-201ENSMUST00000181978 981 ntBASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Gm16476-201ENSMUST00000221544 139 ntBASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Gm3222-201ENSMUST00000071282 990 ntBASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Gm10175-201ENSMUST00000086013 645 ntBASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nop56Q9D6Z1 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Gm11779-201ENSMUST00000118541 368 ntBASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Gm21470-201ENSMUST00000187680 696 ntBASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nop56Q9D6Z1 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Gm10652-201ENSMUST00000199790 2622 ntBASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop56Q9D6Z1 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nop56Q9D6Z1 Paupar-201ENSMUST00000194826 3482 ntBASIC13.66□□□□□ -0.22
Nop56Q9D6Z1 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.66□□□□□ -0.22
Nop56Q9D6Z1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Nop56Q9D6Z1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nop56Q9D6Z1 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms