Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rita1Q9D1H0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rita1Q9D1H0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rita1Q9D1H0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Rita1Q9D1H0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rita1Q9D1H0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rita1Q9D1H0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rita1Q9D1H0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Gm16479-201ENSMUST00000121706 932 ntBASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Gm28693-202ENSMUST00000190758 331 ntBASIC12.17□□□□□ -0.46
Rita1Q9D1H0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rita1Q9D1H0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Mir7221-201ENSMUST00000184009 72 ntBASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.16□□□□□ -0.46
Rita1Q9D1H0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Rita1Q9D1H0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms