Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps28Q9D1C8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Vps28Q9D1C8 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Vps28Q9D1C8 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Vps28Q9D1C8 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.58□□□□□ -0.23
Vps28Q9D1C8 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.58□□□□□ -0.23
Vps28Q9D1C8 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Vps28Q9D1C8 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Vps28Q9D1C8 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Gm27847-201ENSMUST00000183711 107 ntBASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Gm27375-201ENSMUST00000183799 107 ntBASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps28Q9D1C8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps28Q9D1C8 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms