Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Gm12928-201ENSMUST00000117115 573 ntBASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Gm2495-201ENSMUST00000191160 466 ntBASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Gm45841-201ENSMUST00000207700 164 ntBASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Gm45384-201ENSMUST00000210451 277 ntBASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Itm2b-204ENSMUST00000228637 783 ntBASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Rpa3Q9CQ71 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Mir692-1-201ENSMUST00000102263 109 ntBASIC14□□□□□ -0.17
Rpa3Q9CQ71 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Gm9794-201ENSMUST00000202370 423 ntBASIC14□□□□□ -0.17
Rpa3Q9CQ71 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14□□□□□ -0.17
Rpa3Q9CQ71 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa3Q9CQ71 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms