Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
H2afb1Q9CQ70 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb1Q9CQ70 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb1Q9CQ70 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb1Q9CQ70 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb1Q9CQ70 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb1Q9CQ70 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Gm14719-201ENSMUST00000121891 340 ntBASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Gm19931-201ENSMUST00000198920 368 ntBASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.86□□□□□ -0.67
H2afb1Q9CQ70 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms