Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Gm10175-201ENSMUST00000086013 645 ntBASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Krt88Q9CPR6 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Krt88Q9CPR6 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Krt88Q9CPR6 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Krt88Q9CPR6 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Krt88Q9CPR6 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Krt88Q9CPR6 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Krt88Q9CPR6 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Krt88Q9CPR6 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Gm43575-201ENSMUST00000196420 516 ntBASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Gm45841-201ENSMUST00000207700 164 ntBASIC11.95□□□□□ -0.5
Krt88Q9CPR6 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Krt88Q9CPR6 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Gm25287-201ENSMUST00000103846 110 ntBASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Gm22918-201ENSMUST00000103855 110 ntBASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Gm25911-201ENSMUST00000157621 56 ntBASIC11.94□□□□□ -0.5
Krt88Q9CPR6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Gm5425-201ENSMUST00000214125 459 ntBASIC11.94□□□□□ -0.5
Krt88Q9CPR6 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.94□□□□□ -0.5
Krt88Q9CPR6 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Krt88Q9CPR6 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms