Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim8Q99PJ2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13□□□□□ -0.33
Trim8Q99PJ2 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim8Q99PJ2 Gm28323-201ENSMUST00000186817 2499 ntBASIC13□□□□□ -0.33
Trim8Q99PJ2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim8Q99PJ2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim8Q99PJ2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim8Q99PJ2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim8Q99PJ2 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim8Q99PJ2 Gm13859-201ENSMUST00000119936 1423 ntBASIC13□□□□□ -0.33
Trim8Q99PJ2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim8Q99PJ2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13□□□□□ -0.33
Trim8Q99PJ2 Gm15770-201ENSMUST00000117498 584 ntBASIC13□□□□□ -0.33
Trim8Q99PJ2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13□□□□□ -0.33
Trim8Q99PJ2 Gm15653-201ENSMUST00000119247 907 ntBASIC13□□□□□ -0.33
Trim8Q99PJ2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Trim8Q99PJ2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim8Q99PJ2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13□□□□□ -0.33
Trim8Q99PJ2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim8Q99PJ2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim8Q99PJ2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13□□□□□ -0.33
Trim8Q99PJ2 Gm10766-202ENSMUST00000194123 606 ntBASIC13□□□□□ -0.33
Trim8Q99PJ2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim8Q99PJ2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Trim8Q99PJ2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim8Q99PJ2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim8Q99PJ2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim8Q99PJ2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim8Q99PJ2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim8Q99PJ2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim8Q99PJ2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim8Q99PJ2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim8Q99PJ2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim8Q99PJ2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim8Q99PJ2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim8Q99PJ2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim8Q99PJ2 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim8Q99PJ2 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.99□□□□□ -0.33
Trim8Q99PJ2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim8Q99PJ2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms