Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Gm12960-201ENSMUST00000120017 1066 ntBASIC17.31■□□□□ 0.36
Rtn4Q99P72 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4Q99P72 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Gm4804-201ENSMUST00000182234 999 ntBASIC17.31■□□□□ 0.36
Rtn4Q99P72 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4Q99P72 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4Q99P72 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.31■□□□□ 0.36
Rtn4Q99P72 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Gm8131-201ENSMUST00000213783 1570 ntBASIC17.31■□□□□ 0.36
Rtn4Q99P72 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Rtn4Q99P72 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rtn4Q99P72 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rtn4Q99P72 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Gm5279-201ENSMUST00000199575 745 ntBASIC17.3■□□□□ 0.36
Rtn4Q99P72 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn4Q99P72 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4Q99P72 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4Q99P72 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4Q99P72 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4Q99P72 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rtn4Q99P72 Gm13438-201ENSMUST00000120100 573 ntBASIC17.29■□□□□ 0.36
Rtn4Q99P72 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.29■□□□□ 0.36
Rtn4Q99P72 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4Q99P72 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC17.29■□□□□ 0.36
Rtn4Q99P72 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.29■□□□□ 0.36
Rtn4Q99P72 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rtn4Q99P72 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC17.29■□□□□ 0.36
Rtn4Q99P72 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC17.29■□□□□ 0.36
Rtn4Q99P72 Gm6681-201ENSMUST00000205215 607 ntBASIC17.29■□□□□ 0.36
Rtn4Q99P72 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4Q99P72 AC134254.4-201ENSMUST00000223086 370 ntBASIC17.29■□□□□ 0.36
Rtn4Q99P72 Gm25857-201ENSMUST00000082788 129 ntBASIC17.29■□□□□ 0.36
Rtn4Q99P72 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4Q99P72 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4Q99P72 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4Q99P72 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rtn4Q99P72 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4Q99P72 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4Q99P72 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4Q99P72 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4Q99P72 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn4Q99P72 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn4Q99P72 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn4Q99P72 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rtn4Q99P72 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC17.28■□□□□ 0.36
Rtn4Q99P72 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC17.28■□□□□ 0.36
Rtn4Q99P72 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn4Q99P72 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rtn4Q99P72 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.28■□□□□ 0.36
Rtn4Q99P72 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn4Q99P72 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn4Q99P72 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC17.28■□□□□ 0.36
Rtn4Q99P72 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC17.28■□□□□ 0.36
Rtn4Q99P72 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn4Q99P72 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC17.28■□□□□ 0.36
Rtn4Q99P72 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rtn4Q99P72 Gm21089-201ENSMUST00000215843 325 ntBASIC17.28■□□□□ 0.36
Rtn4Q99P72 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC17.28■□□□□ 0.36
Rtn4Q99P72 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms