Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.98□□□□□ -0.17
Usp11Q99K46 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Usp11Q99K46 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Usp11Q99K46 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.98□□□□□ -0.17
Usp11Q99K46 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp11Q99K46 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp11Q99K46 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.98□□□□□ -0.17
Usp11Q99K46 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.98□□□□□ -0.17
Usp11Q99K46 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.98□□□□□ -0.17
Usp11Q99K46 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.98□□□□□ -0.17
Usp11Q99K46 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp11Q99K46 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Usp11Q99K46 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp11Q99K46 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp11Q99K46 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp11Q99K46 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp11Q99K46 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp11Q99K46 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Usp11Q99K46 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp11Q99K46 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp11Q99K46 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Usp11Q99K46 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.98□□□□□ -0.17
Usp11Q99K46 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Usp11Q99K46 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp11Q99K46 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp11Q99K46 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp11Q99K46 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp11Q99K46 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Usp11Q99K46 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp11Q99K46 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp11Q99K46 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.97□□□□□ -0.17
Usp11Q99K46 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp11Q99K46 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Usp11Q99K46 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp11Q99K46 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Usp11Q99K46 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp11Q99K46 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp11Q99K46 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.97□□□□□ -0.17
Usp11Q99K46 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp11Q99K46 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp11Q99K46 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
Usp11Q99K46 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp11Q99K46 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Usp11Q99K46 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Usp11Q99K46 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.97□□□□□ -0.17
Usp11Q99K46 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.97□□□□□ -0.17
Usp11Q99K46 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.97□□□□□ -0.17
Usp11Q99K46 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Usp11Q99K46 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.97□□□□□ -0.17
Usp11Q99K46 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp11Q99K46 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.97□□□□□ -0.17
Usp11Q99K46 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Usp11Q99K46 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Usp11Q99K46 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Usp11Q99K46 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Usp11Q99K46 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Usp11Q99K46 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp11Q99K46 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.97□□□□□ -0.17
Usp11Q99K46 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Usp11Q99K46 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp11Q99K46 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp11Q99K46 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Usp11Q99K46 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Usp11Q99K46 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Usp11Q99K46 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.96□□□□□ -0.17
Usp11Q99K46 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp11Q99K46 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Usp11Q99K46 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp11Q99K46 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Usp11Q99K46 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Usp11Q99K46 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp11Q99K46 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp11Q99K46 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Usp11Q99K46 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Usp11Q99K46 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Usp11Q99K46 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp11Q99K46 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp11Q99K46 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.96□□□□□ -0.17
Usp11Q99K46 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Usp11Q99K46 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Usp11Q99K46 Gm5354-201ENSMUST00000182417 973 ntBASIC13.96□□□□□ -0.17
Usp11Q99K46 Gm28631-201ENSMUST00000190740 334 ntBASIC13.96□□□□□ -0.17
Usp11Q99K46 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.96□□□□□ -0.17
Usp11Q99K46 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp11Q99K46 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp11Q99K46 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp11Q99K46 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp11Q99K46 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Usp11Q99K46 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp11Q99K46 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp11Q99K46 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Usp11Q99K46 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Usp11Q99K46 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Usp11Q99K46 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Usp11Q99K46 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Usp11Q99K46 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Usp11Q99K46 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Usp11Q99K46 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Usp11Q99K46 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Usp11Q99K46 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms