Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Smarcd2Q99JR8 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd2Q99JR8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd2Q99JR8 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd2Q99JR8 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd2Q99JR8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.33□□□□□ -0.28
Smarcd2Q99JR8 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd2Q99JR8 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd2Q99JR8 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd2Q99JR8 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Smarcd2Q99JR8 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd2Q99JR8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd2Q99JR8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Smarcd2Q99JR8 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.33□□□□□ -0.28
Smarcd2Q99JR8 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Smarcd2Q99JR8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd2Q99JR8 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd2Q99JR8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd2Q99JR8 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcd2Q99JR8 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Gm22121-201ENSMUST00000175148 54 ntBASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Mir5132-201ENSMUST00000175166 71 ntBASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Gm5363-201ENSMUST00000211927 938 ntBASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Smarcd2Q99JR8 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Snord83b-201ENSMUST00000104546 94 ntBASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd2Q99JR8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms