Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Gm37396-201ENSMUST00000191827 1495 ntBASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Gm14975-201ENSMUST00000118741 664 ntBASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Gm12341-201ENSMUST00000119724 503 ntBASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Gm12105-201ENSMUST00000120846 779 ntBASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Krtap22-2-201ENSMUST00000178913 380 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Gm37241-201ENSMUST00000191736 523 ntBASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Gm6745-201ENSMUST00000199216 526 ntBASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb20Q91XZ9 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Gm12490-201ENSMUST00000120255 560 ntBASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Gm3715-201ENSMUST00000172308 617 ntBASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Gm2445-201ENSMUST00000182798 989 ntBASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Gm28917-201ENSMUST00000187294 237 ntBASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Gm43774-201ENSMUST00000196327 878 ntBASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Gm43489-201ENSMUST00000196810 993 ntBASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Gm18307-201ENSMUST00000206864 949 ntBASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Gm5186-201ENSMUST00000218781 920 ntBASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Gm18387-201ENSMUST00000220333 702 ntBASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb20Q91XZ9 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms